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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12813756 chr12:63429325 A/C KRTAP13-1 chr21:31768392-31769140:+ 0.14 6.49 2.7E-10 Box Plot
BLCA rs12815621 chr12:63438672 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.13 6.39 4.94E-10 Box Plot
BLCA rs12871823 chr13:36089568 G/C PRKAA1 chr5:40759481-40798476:- 0.49 6.05 3.39E-9 Box Plot
BLCA rs12878705 chr14:96111888 G/A CUZD1 chr10:124591665-124610309:- -0.61 -6.18 1.67E-9 Box Plot
BLCA rs12878705 chr14:96111888 G/A FAM24B chr10:124608594-124639157:- -0.65 -6.18 1.66E-9 Box Plot
BLCA rs1288172 chr6:113328787 C/T HDAC2 chr6:114254192-114332472:- 0.61 6.55 1.84E-10 Box Plot
BLCA rs12882250 chr14:39882965 A/G LOC647288 chr13:75811890-75814517:- -0.38 -6.28 8.95E-10 Box Plot
BLCA rs12883781 chr14:39776835 C/T LOC647288 chr13:75811890-75814517:- -0.4 -6.43 3.77E-10 Box Plot
BLCA rs12892482 chr14:39753135 A/C LOC647288 chr13:75811890-75814517:- -0.39 -6.39 4.81E-10 Box Plot
BLCA rs12894855 chr14:39857249 T/C LOC647288 chr13:75811890-75814517:- -0.38 -6.33 6.83E-10 Box Plot
BLCA rs12896838 chr14:39757960 G/A LOC647288 chr13:75811890-75814517:- -0.39 -6.24 1.17E-9 Box Plot
BLCA rs12897960 chr14:39875949 T/C LOC647288 chr13:75811890-75814517:- -0.38 -6.28 8.95E-10 Box Plot
BLCA rs12899496 chr15:91517796 C/T LEPR chr1:65886335-66107242:+ 0.71 6.1 2.63E-9 Box Plot
BLCA rs1290067 chr6:112848040 A/G C6orf182 chr6:109416356-109485113:+ -0.73 -7.47 5.51E-13 Box Plot
BLCA rs1290067 chr6:112848040 A/G CCNC chr6:99990256-100016849:- -0.81 -6.84 3.21E-11 Box Plot